Protein mass ↔ moles converter

To convert protein mass to moles, divide micrograms by the molecular weight in kilodaltons and multiply by 1,000: pmol = µg × 10³ / kDa. Ten micrograms of a 50 kDa protein is 200 pmol — about 1.2 × 10¹⁴ molecules (pmol × 6.022 × 10¹¹).

µg
kDa

Result

Amount200pmol
Molecules1.204e14

pmol = µg × 10³ / kDa (Promega BioMath). Molecules = pmol × 6.022 × 10¹¹ (Avogadro). 10 µg of a 50 kDa protein is 200 pmol ≈ 1.2 × 10¹⁴ molecules.

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Formula

pmol = µg × 10³ / kDa · µg = pmol × kDa / 10³ · molecules = pmol × 6.022 × 10¹¹

Source: Promega BioMath protein molar conversions; Avogadro constant (SI 2019)

Worked example

Given: 10 µg of a 50 kDa protein

  1. 1.pmol = 10 × 10³ / 50 = 200 pmol.
  2. 2.Molecules = 200 × 6.022 × 10¹¹ = 1.20 × 10¹⁴.

10 µg at 50 kDa = 200 pmol ≈ 1.2 × 10¹⁴ molecules

How the calculation flows

Protein mass ↔ moles converter — calculation flowMass to moles for protein: kilodaltons are kg/mol, so µg over kDa gives nanomoles ×10³ = picomoles; Avogadro scales to molecules.massµg protein× 10³ / kDaMW from sequence or gelamountpmol× Nₐmolecules
Mass to moles for protein: kilodaltons are kg/mol, so µg over kDa gives nanomoles ×10³ = picomoles; Avogadro scales to molecules.

Units & constants

Identity1 kDa = 1,000 g/mol; pmol = µg·10³/kDa follows directly
Avogadro constant6.02214076 × 10²³ mol⁻¹ (exact, SI 2019)
MW sourceSequence-derived (ProtParam / in-app protein tools) beats gel estimates
Typical usesEnzyme:substrate molar ratios, binding stoichiometry, standards for quantitative MS
PriceFree

When do you need protein amounts in moles?

Whenever stoichiometry matters: setting an enzyme-to-substrate molar ratio, saturating a binding partner, loading equimolar amounts of two proteins of different sizes, or preparing an internal standard. Equal masses of a 25 kDa and a 100 kDa protein differ four-fold in molar amount — mass-based loading silently biases any molar comparison.

Where should the molecular weight come from?

Compute it from the sequence when you have one — tools like ExPASy ProtParam (or Talindrew's protein properties, which implement the same method) give the exact average mass including tags. SDS-PAGE apparent MW can run 10–20% off for acidic, proline-rich or glycosylated proteins, and using it doubles as an error source in the conversion.

Frequently asked questions

How many molecules are in 1 pmol?
6.022 × 10¹¹ — Avogadro's number scaled by 10⁻¹². A picomole of anything is about six hundred billion molecules, a useful sanity anchor for single-molecule and qPCR-adjacent arithmetic.
Does this work for antibodies?
Yes — use ~150 kDa for whole IgG. 1 µg of IgG is 6.7 fmol (0.0067 pmol × 10³/150), which is why molar excesses in antibody labelling reactions consume more reagent than intuition suggests.

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